Season 3
The third season consists of 26 episodes, originally airing from August 2013 to June 2016. In this season, BoBoiBoy defeats Ejo Jo, and Adu Du bin Abu Seman becomes BoBoiBoy's friend but he turns evil back again because of his mother. Boboiboy also gets his new Fire and Water Elemental powers. This is the first season that new episodes would be uploaded onto YouTube before its first airing on TV. It is also the first season to change the theme song, switching out "BoBoiBoy Superhero Kita" (English: BoBoiBoy, Our Superhero!) with "Jagalah Bumi" by Kotak.
BoBoiBoy vs. Ejo Jo
BoBoiBoy vs. Ejo Jo — Final Battle
In Memory of Probe
Operation Cocoa
Cocoa Jumbo's Rampage
Mr. Baga Ga's Service
Rob, Robert, and Roberto's Robbery
The Five Sly Scammers!
The Battle on the Moon
Papa Zola & Mama Zila
Mama Zila Attacks
Adu Du's Mom
Adu Du's Return To Evil
PangoBot & The Onion Monster
The Arsonist
BoBoiBoy Fire Ignites!
Danger: BoBoiBot
Everybody Loves BoBoiBot
BoBoiBoy's Water Surprise
Rise Up! BoBoiBoy Water!
Special Episode: Saving Planet Earth (Part 1)
Special Episode: Saving Planet Earth (Part 2)
Special Episode: Saving Planet Earth (Part 3)
Enemies, Old and New
Between Friend and Foe
See You Next Time, BoBoiBoy